What TBI computer are you using? The 1227747 is good. The 16197427 is better.
What Transmission are you using 700R4 / 4L60E / 4L80E / Manual? Automatic and Manual transmission have very different Deceleration Fuel Cut-Off (DFCO) Parameters.
Tuning is basically corrections to the factory fuel and spark tables. Let the tuner know EVERTHING you modified.
One possible challenge is the injector flow rate, often the advertised flow rate, actual flow rate, and flow rate parameter programmed in the chip are not aligned. . . apples / oranges / bananas
Timing table tuning is challenging, because camshaft profile, cylinder head combustion chamber design (like fast burn heads), pistons (like flat top vs. dish), compression ratio, intake manifold, and headers affect knock / detonation / engine performance.
Using an Air Fuel Ratio meter for tuning is a good plan, even better if the AFR's are recorded real time and align with the engine parameters (MAP Sensor vs. Engine RPM). For example, knowing the AFR's at a steady 60 MPH is good . . . but knowing the AFR's accelerating from 0 MPH to 60 MPH is better.
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